STRINGSTRING
PITG_00148 protein (Phytophthora infestans) - STRING interaction network
"PITG_00148" - Programmed cell death 6-interacting protein, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00148Programmed cell death 6-interacting protein, putative (881 aa)    
Predicted Functional Partners:
PITG_12696
Putative uncharacterized protein (255 aa)
     
  0.991
PITG_17455
Vacuolar protein sorting-associating protein, putative (460 aa)
     
  0.887
PITG_08736
Putative uncharacterized protein (712 aa)
     
  0.811
PITG_17335
Charged multivesicular body protein 2a (233 aa)
     
  0.647
PITG_04534
Vacuolar protein sorting-associated protein 28 (231 aa)
       
  0.634
PITG_16090
Putative uncharacterized protein (2189 aa)
     
  0.618
PITG_22021
HECT E3 ubiquitin ligase, putative (584 aa)
     
  0.602
PITG_10836
HECT E3 ubiquitin ligase, putative (641 aa)
     
  0.602
PITG_06707
HECT E3 ubiquitin ligase, putative (658 aa)
     
  0.602
PITG_05463
HECT E3 ubiquitin ligase, putative (783 aa)
     
  0.602
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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