STRINGSTRING
PITG_00180 protein (Phytophthora infestans) - STRING interaction network
"PITG_00180" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00180Putative uncharacterized protein (632 aa)    
Predicted Functional Partners:
PITG_11158
Pre-mRNA-splicing factor SYF1-like protein (887 aa)
     
 
  0.818
PITG_08189
Pre-mRNA-splicing factor, Crooked neck-like protein (688 aa)
     
 
0.808
PITG_00472
Pre-mRNA-splicing factor syf2 (215 aa)
         
    0.800
PITG_06288
Protein kinase (870 aa)
   
  0.797
PITG_06415
Heat shock protein 90 (706 aa)
   
  0.791
PITG_05552
Heat shock protein 75 kDa, mitochondrial (689 aa)
   
  0.791
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.786
PITG_12873
Putative uncharacterized protein (637 aa)
       
  0.773
PITG_01713
Putative uncharacterized protein (442 aa)
       
  0.773
PITG_02810
Cell division cycle protein 16 (609 aa)
     
  0.743
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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