STRINGSTRING
PITG_00223 protein (Phytophthora infestans) - STRING interaction network
"PITG_00223" - DNA repair and recombination protein RAD54 in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00223DNA repair and recombination protein RAD54 (1076 aa)    
Predicted Functional Partners:
PITG_22611
Protein recA (131 aa)
   
 
  0.924
PITG_15906
DNA repair protein RAD51 (338 aa)
   
 
  0.924
PITG_10832
Protein recA (366 aa)
   
 
  0.924
PITG_07299
Putative uncharacterized protein (425 aa)
   
 
  0.924
PITG_01300
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1329 aa)
   
  0.877
PITG_07874
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1505 aa)
   
  0.862
PITG_07823
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (807 aa)
   
  0.862
PITG_19165
DNA repair and recombination protein radA, putative (306 aa)
   
 
  0.798
PITG_09305
DNA repair protein RAD51 (284 aa)
   
 
  0.798
PITG_16527
Bloom syndrome protein, DEAD/DEAH box helicase (400 aa)
   
 
  0.792
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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