STRINGSTRING
PITG_00295 protein (Phytophthora infestans) - STRING interaction network
"PITG_00295" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00295Putative uncharacterized protein (299 aa)    
Predicted Functional Partners:
PITG_08366
Parafibromin-like protein (410 aa)
     
  0.950
PITG_03364
RNA polymerase II-associated factor 1 (509 aa)
     
  0.949
PITG_21601
Putative uncharacterized protein (1564 aa)
       
  0.930
PITG_03206
Putative uncharacterized protein (1539 aa)
       
  0.930
PITG_08452
Putative uncharacterized protein (466 aa)
     
  0.890
PITG_03348
RNA polymerase-associated protein CTR9 (1166 aa)
       
  0.856
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
       
 
  0.729
PITG_09042
DEAD/DEAH box RNA helicase, putative (1049 aa)
       
  0.702
PITG_08995
Putative uncharacterized protein (219 aa)
       
  0.702
PITG_05685
Transcription elongation factor SPT5, putative (1142 aa)
       
    0.698
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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