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PITG_00448 protein (Phytophthora infestans) - STRING interaction network
"PITG_00448" - tRNA in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00448tRNA (Cytosine-5-)-methyltransferase NSUN2, putative (637 aa)    
Predicted Functional Partners:
PITG_03452
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (756 aa)
     
 
  0.908
PITG_03308
Putative uncharacterized protein (566 aa)
     
      0.893
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
 
  0.880
PITG_00165
Putative uncharacterized protein (340 aa)
     
 
  0.863
PITG_12107
Putative uncharacterized protein (315 aa)
     
 
  0.859
PITG_11198
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (664 aa)
     
 
  0.859
PITG_12165
DEAD/DEAH box RNA helicase, putative (763 aa)
     
 
  0.856
PITG_00663
rRNA methyltransferase, putative; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (881 aa)
   
 
  0.854
PITG_13131
Nucleolar complex protein, putative (736 aa)
     
      0.852
PITG_14248
rRNA-processing protein EBP2, putative (313 aa)
     
 
  0.837
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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