STRINGSTRING
PITG_00499 protein (Phytophthora infestans) - STRING interaction network
"PITG_00499" - ATP-dependent RNA helicase dbp4, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00499ATP-dependent RNA helicase dbp4, putative (524 aa)    
Predicted Functional Partners:
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
   
  0.954
PITG_03856
Peptidyl-prolyl cis-trans isomerase, putative (478 aa)
   
  0.823
PITG_20194
Protein mago nashi (158 aa)
     
  0.744
PITG_08765
RNA binding protein, putative (166 aa)
     
  0.728
PITG_03308
Putative uncharacterized protein (566 aa)
     
      0.716
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.716
PITG_00227
DEAD/DEAH box RNA helicase, putative (609 aa)
   
 
0.701
PITG_20384
Putative uncharacterized protein (207 aa)
     
  0.685
PITG_03764
Polyribonucleotide nucleotidyltransferase, putative (893 aa)
   
 
  0.665
PITG_09211
Putative uncharacterized protein (3898 aa)
   
  0.654
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (10%) [HD]