STRINGSTRING
PITG_00538 protein (Phytophthora infestans) - STRING interaction network
"PITG_00538" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00538Putative uncharacterized protein (162 aa)    
Predicted Functional Partners:
PITG_08452
Putative uncharacterized protein (466 aa)
     
 
    0.483
PITG_14137
Histone-lysine N-methyltransferase, putative (1501 aa)
     
    0.480
PITG_01229
Putative uncharacterized protein (344 aa)
     
  0.476
PITG_03364
RNA polymerase II-associated factor 1 (509 aa)
     
 
    0.471
PITG_13041
RNA polymerase-associated protein RTF1 (760 aa)
     
 
    0.467
PITG_05685
Transcription elongation factor SPT5, putative (1142 aa)
     
 
    0.455
PITG_11170
Histone-binding protein RBBP4 (443 aa)
     
      0.441
PITG_11169
Histone-binding protein RBBP7 (671 aa)
     
      0.441
PITG_06708
Cyclin-dependent kinase, putative (654 aa)
     
    0.441
PITG_02446
Cyclin-dependent kinase, putative (425 aa)
     
    0.441
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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