STRINGSTRING
PITG_00853 protein (Phytophthora infestans) - STRING interaction network
"PITG_00853" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00853Putative uncharacterized protein (164 aa)    
Predicted Functional Partners:
PITG_13972
U6 snRNA-associated Sm-like protein LSm6, putative (83 aa)
     
 
  0.901
PITG_09828
U6 snRNA-associated Sm-like protein LSm3, putative (92 aa)
     
 
  0.875
PITG_00117
Splicing factor 3A (493 aa)
     
 
  0.796
PITG_09653T0
U6 snRNA-associated Sm-like protein LSm4, putative (79 aa)
     
 
  0.745
PITG_09610
U6 snRNA-associated Sm-like protein (82 aa)
     
 
  0.745
PITG_09488
Small nuclear ribonucleoprotein Sm D3 (113 aa)
     
      0.713
PITG_05680
Putative uncharacterized protein (150 aa)
       
 
  0.711
PITG_03300
U4/U6 small nuclear ribonucleoprotein Prp31 (529 aa)
     
 
  0.707
PITG_14575
U6 snRNA-associated Sm-like protein, putative (106 aa)
     
 
  0.705
PITG_07053
Putative uncharacterized protein (540 aa)
     
      0.704
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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