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PITG_00863 protein (Phytophthora infestans) - STRING interaction network
"PITG_00863" - DEAD/DEAH box RNA helicase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_00863DEAD/DEAH box RNA helicase, putative (411 aa)    
Predicted Functional Partners:
PITG_10923
Apolipoprotein A-I-binding protein, putative (178 aa)
     
  0.986
PITG_11083
Putative uncharacterized protein (315 aa)
     
  0.955
PITG_18474
CCR4-NOT transcription complex subunit, putative (2370 aa)
     
 
  0.923
PITG_03118
mRNA decapping enzyme (429 aa)
     
  0.892
PITG_14575
U6 snRNA-associated Sm-like protein, putative (106 aa)
     
  0.888
PITG_13972
U6 snRNA-associated Sm-like protein LSm6, putative (83 aa)
     
  0.883
PITG_09437
Putative uncharacterized protein (102 aa)
       
  0.859
PITG_09436
Putative uncharacterized protein (116 aa)
       
  0.859
PITG_09653T0
U6 snRNA-associated Sm-like protein LSm4, putative (79 aa)
     
  0.834
PITG_09610
U6 snRNA-associated Sm-like protein (82 aa)
     
  0.834
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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