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PITG_01042 protein (Phytophthora infestans) - STRING interaction network
"PITG_01042" - 60S ribosomal protein L22, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_0104260S ribosomal protein L22, putative (125 aa)    
Predicted Functional Partners:
PITG_03762
60S ribosomal protein L38, putative (78 aa)
     
  0.985
PITG_02578
Ribosomal protein L15 (206 aa)
     
  0.984
PITG_09442
40S ribosomal protein S21 (79 aa)
     
  0.983
PITG_20188
60S ribosomal protein L5 (312 aa)
     
  0.982
PITG_15722
60S ribosomal protein L5 (192 aa)
     
  0.982
PITG_20264
40S ribosomal protein S13 (151 aa)
     
  0.979
PITG_05171
60S ribosomal protein L44 (104 aa)
     
 
  0.974
PITG_10202
Putative uncharacterized protein (63 aa)
     
  0.974
PITG_00631
Putative uncharacterized protein (67 aa)
     
 
  0.973
PITG_06237
60S ribosomal protein L8, putative (256 aa)
     
  0.970
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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