STRINGSTRING
PITG_01044 protein (Phytophthora infestans) - STRING interaction network
"PITG_01044" - DNA repair protein RAD50, putative in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01044DNA repair protein RAD50, putative (1280 aa)    
Predicted Functional Partners:
PITG_13158
Double-strand break repair protein, putative (863 aa)
   
  0.993
PITG_02495
Phosphatidylinositol kinase (PIK-L4) (3049 aa)
     
  0.911
PITG_12104
ATP-dependent DNA helicase 2 subunit, putative (607 aa)
     
  0.894
PITG_00175
Putative uncharacterized protein (349 aa)
     
  0.883
PITG_16376
Putative uncharacterized protein (767 aa)
     
  0.881
PITG_05679
Replication protein A 70 kDa DNA-binding subunit, putative (629 aa)
     
  0.869
PITG_18049
Chromosome segregation protein, putative (1211 aa)
   
  0.866
PITG_01300
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1329 aa)
     
  0.854
PITG_21279
Putative uncharacterized protein (129 aa)
   
  0.852
PITG_12213
Exonuclease 1, putative (401 aa)
   
  0.852
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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