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PITG_01045 protein (Phytophthora infestans) - STRING interaction network
"PITG_01045" - tRNA pseudouridine synthase D in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01045tRNA pseudouridine synthase D (TruD), putative (803 aa)    
Predicted Functional Partners:
PITG_12225
Nucleolar complex protein 3 (812 aa)
     
      0.753
PITG_02420
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1179 aa)
   
        0.743
PITG_19742
Putative uncharacterized protein (122 aa)
     
        0.707
PITG_08708
Putative uncharacterized protein (1005 aa)
     
        0.707
PITG_08996
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (427 aa)
     
        0.706
PITG_07017
Putative uncharacterized protein (1151 aa)
     
        0.706
PITG_03308
Putative uncharacterized protein (566 aa)
     
      0.688
PITG_07296
Nucleolar protein 10, putative (717 aa)
     
        0.685
PITG_10015
Glutamate-rich WD repeat-containing protein (487 aa)
     
   
  0.678
PITG_08026
DEAD/DEAH box RNA helicase, putative (758 aa)
     
 
  0.675
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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