STRINGSTRING
PITG_01536 protein (Phytophthora infestans) - STRING interaction network
"PITG_01536" - HECT E3 ubiquitin ligase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01536HECT E3 ubiquitin ligase, putative (432 aa)    
Predicted Functional Partners:
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.968
PITG_23159
HECT E3 ubiquitin ligase, putative (1737 aa)
     
 
  0.908
PITG_11567
Putative uncharacterized protein (1937 aa)
     
 
  0.885
PITG_03267
Putative uncharacterized protein (2268 aa)
     
 
  0.885
PITG_02027
Putative uncharacterized protein (2012 aa)
     
 
  0.885
PITG_06288
Protein kinase (870 aa)
     
  0.713
PITG_00421
Putative uncharacterized protein (1611 aa)
     
  0.711
PITG_18001
Ubiquitin, putative (175 aa)
       
  0.707
PITG_16311
PolyubiquitinUbiquitin (305 aa)
       
  0.707
PITG_10193
Ubiquitin, putative (156 aa)
       
  0.707
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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