STRINGSTRING
PITG_01867 protein (Phytophthora infestans) - STRING interaction network
"PITG_01867" - Splicing factor U2af large subunit, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01867Splicing factor U2af large subunit, putative (597 aa)    
Predicted Functional Partners:
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
  0.961
PITG_05688
Splicing factor U2AF 35 kDa subunit (340 aa)
     
  0.961
PITG_01528
Cell division cycle 5-related protein, putative (761 aa)
     
  0.955
PITG_04376
Putative uncharacterized protein (550 aa)
     
  0.955
PITG_05366
Branchpoint-bridging protein, putative (596 aa)
     
  0.934
PITG_07775
Splicing factor 3B subunit, putative (235 aa)
     
  0.929
PITG_06171
Splicing factor 3B subunit 1 (1235 aa)
     
  0.929
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
  0.892
PITG_03569
Putative uncharacterized protein (405 aa)
     
 
  0.888
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
     
  0.872
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (8%) [HD]