STRINGSTRING
PITG_01925 protein (Phytophthora infestans) - STRING interaction network
"PITG_01925" - Transmembrane protein, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01925Transmembrane protein, putative (268 aa)    
Predicted Functional Partners:
PITG_14854
Signal recognition particle, putative; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (602 aa)
     
  0.970
PITG_06635
Signal recognition particle, putative; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (649 aa)
     
  0.969
PITG_01171
Signal recognition particle, putative (511 aa)
     
  0.966
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.687
PITG_02053
40S ribosomal protein S8 (213 aa)
   
 
    0.663
PITG_01207
Ribosome biogenesis protein NSA2 (260 aa)
   
 
    0.570
PITG_03614
Signal recognition particle receptor subunit alpha (549 aa)
       
  0.549
PITG_05171
60S ribosomal protein L44 (104 aa)
     
 
    0.514
PITG_00941
60S ribosomal protein L21-1 (160 aa)
   
 
    0.513
PITG_14850
40S ribosomal protein S7 (190 aa)
     
 
    0.512
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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