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PITG_01947 protein (Phytophthora infestans) - STRING interaction network
"PITG_01947" - COPII coat assembly protein SEC16, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01947COPII coat assembly protein SEC16, putative (2641 aa)    
Predicted Functional Partners:
PITG_12694
Protein transport protein SEC13 (309 aa)
       
  0.846
PITG_03390
WD domain-containing protein, putative (342 aa)
       
  0.846
PITG_03594
Protein transporter Sec31A, putative (1264 aa)
     
 
  0.738
PITG_12260
Protein transporter Sec24 (1023 aa)
     
  0.719
PITG_09965
Protein transport Sec23/Sec24-like protein (846 aa)
     
  0.698
PITG_13151
Protein transporter Sec24 (1210 aa)
     
  0.580
PITG_02068
GTP-binding protein SAR1 (191 aa)
       
  0.519
PITG_00089
GTP-binding protein SAR1 (191 aa)
       
  0.519
PITG_18070
Phospholipase, putative (861 aa)
     
 
    0.504
PITG_01386
Phospholipase, putative (1103 aa)
     
 
    0.504
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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