STRINGSTRING
PITG_01961 protein (Phytophthora infestans) - STRING interaction network
"PITG_01961" - DCN1-like protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01961DCN1-like protein (249 aa)    
Predicted Functional Partners:
PITG_10419
Ubiquitin-conjugating enzyme E2, putative (230 aa)
     
 
  0.879
PITG_05762
Cullin family protein, putative (755 aa)
     
 
  0.723
PITG_03075
Cullin family protein, putative (772 aa)
     
 
  0.723
PITG_02724
Cullin family protein, putative (553 aa)
     
 
  0.723
PITG_03561
COP9 signalosome complex subunit 5, putative (362 aa)
     
 
  0.716
PITG_06199
Cullin family protein, putative (1017 aa)
     
 
  0.702
PITG_01524
RING-box protein 1 (111 aa)
     
 
  0.590
PITG_17942
Ubiquitin activating enzyme, E1 family, putative (526 aa)
     
 
  0.552
PITG_18001
Ubiquitin, putative (175 aa)
       
 
  0.542
PITG_16311
PolyubiquitinUbiquitin (305 aa)
       
 
  0.542
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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