STRINGSTRING
PITG_01996 protein (Phytophthora infestans) - STRING interaction network
"PITG_01996" - Transcription factor, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_01996Transcription factor, putative (904 aa)    
Predicted Functional Partners:
PITG_16669
Transcription factor IIIB, putative (589 aa)
     
  0.954
PITG_19533
Cleavage and polyadenylation specificity factor subunit, putative (222 aa)
     
      0.883
PITG_19532
Cleavage and polyadenylation specificity factor subunit, putative (513 aa)
     
      0.883
PITG_22644
Putative uncharacterized protein (176 aa)
     
      0.877
PITG_18568
Putative uncharacterized protein (176 aa)
     
      0.877
PITG_18498
Putative uncharacterized protein (1744 aa)
     
      0.877
PITG_12330
Cleavage and polyadenylation specificity factor subunit, putative (1561 aa)
     
      0.877
PITG_04377
Putative uncharacterized protein (455 aa)
       
  0.784
PITG_14596
Transcription initiation factor IIB, putative (308 aa)
     
  0.726
PITG_01606
Putative uncharacterized protein (1186 aa)
     
      0.714
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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