STRINGSTRING
PITG_02054 protein (Phytophthora infestans) - STRING interaction network
"PITG_02054" - DNA primase in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02054DNA primase (428 aa)    
Predicted Functional Partners:
PITG_15868
DNA primase, putative; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication (468 aa)
   
  0.998
PITG_00557
DNA primase, putative (423 aa)
   
  0.998
PITG_05585
DNA polymerase subunit alpha B, putative; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (624 aa)
     
  0.996
PITG_08326
DNA polymerase (1523 aa)
     
  0.995
PITG_07399
DNA replication licensing factor MCM5 (741 aa)
     
  0.975
PITG_03389
Replication factor C subunit 4 (339 aa)
     
  0.969
PITG_12346
DNA replication licensing factor MCM3 (805 aa)
     
  0.955
PITG_15505
DNA polymerase (2403 aa)
     
  0.937
PITG_20527
DNA polymerase (1609 aa)
     
  0.935
PITG_02753
DNA polymerase (1223 aa)
     
  0.933
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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