STRINGSTRING
PITG_02211 protein (Phytophthora infestans) - STRING interaction network
"PITG_02211" - UV excision repair protein RAD23 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02211UV excision repair protein RAD23 (449 aa)    
Predicted Functional Partners:
PITG_10883
26S proteasome non-ATPase regulatory subunit, putative (354 aa)
     
  0.976
PITG_03081
26S proteasome non-ATPase regulatory subunit 2 (897 aa)
     
  0.967
PITG_10602
DNA repair protein, putative (539 aa)
       
  0.963
PITG_02329
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, putative (1555 aa)
       
  0.958
PITG_12185
26S protease regulatory subunit 4 (445 aa)
     
  0.952
PITG_08521
Ubiquitin family RING domain-containing protein (366 aa)
       
  0.942
PITG_08480
Ubiquitin, putative (657 aa)
       
  0.942
PITG_16311
PolyubiquitinUbiquitin (305 aa)
       
0.923
PITG_18001
Ubiquitin, putative (175 aa)
       
0.921
PITG_00654
DNA damage-inducible protein 1, putative (428 aa)
     
 
  0.920
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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