STRINGSTRING
PITG_02303 protein (Phytophthora infestans) - STRING interaction network
"PITG_02303" - Ornithine decarboxylase 1 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02303Ornithine decarboxylase 1 (481 aa)    
Predicted Functional Partners:
PITG_10866
Spermidine synthase, putative (295 aa)
   
  0.971
PITG_22069
Arginase, putative (161 aa)
       
  0.968
PITG_04851
Arginase (355 aa)
       
  0.968
PITG_09271
Ornithine aminotransferase, mitochondrial (432 aa)
   
 
  0.940
PITG_02455
Ornithine decarboxylase, putative (298 aa)
   
   
 
0.810
PITG_13924
Bifunctional aspartokinase/homoserine dehydrogenase, putative (911 aa)
   
 
  0.754
PITG_12514
Bifunctional aspartokinase/homoserine dehydrogenase, putative (893 aa)
   
 
  0.754
PITG_01193
Aspartate aminotransferase, putative (1011 aa)
   
 
  0.743
PITG_17608
Spermine synthase, putative (332 aa)
   
  0.722
PITG_10454
Carbamoyl-phosphate synthase [ammonia], putative (1551 aa)
   
 
  0.684
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (13%) [HD]