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PITG_02450 protein (Phytophthora infestans) - STRING interaction network
"PITG_02450" - Ribosomal RNA assembly protein mis3 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02450Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)    
Predicted Functional Partners:
PITG_05226
Putative uncharacterized protein (500 aa)
     
 
  0.995
PITG_06991
FHA domain-interacting nucleolar phosphoprotein, putative (246 aa)
     
 
  0.992
PITG_07296
Nucleolar protein 10, putative (717 aa)
     
 
  0.978
PITG_00165
Putative uncharacterized protein (340 aa)
     
 
  0.977
PITG_07311
DEAD/DEAH box RNA helicase, putative (709 aa)
     
  0.974
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
  0.973
PITG_11124
Nucleolar complex protein 4 (571 aa)
     
  0.973
PITG_14730
Nucleolar protein, putative (860 aa)
     
  0.972
PITG_12292
rRNA-processing protein, putative (231 aa)
     
  0.972
PITG_04845
Putative uncharacterized protein (428 aa)
     
 
  0.969
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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