STRINGSTRING
PITG_02478 protein (Phytophthora infestans) - STRING interaction network
"PITG_02478" - DEAD/DEAH box RNA helicase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02478DEAD/DEAH box RNA helicase, putative (685 aa)    
Predicted Functional Partners:
PITG_06981
DEAD/DEAH box RNA helicase, putative (847 aa)
   
 
0.970
PITG_13131
Nucleolar complex protein, putative (736 aa)
     
      0.967
PITG_03308
Putative uncharacterized protein (566 aa)
     
      0.960
PITG_19671
N-acetyltransferase 10 (1102 aa)
     
      0.945
PITG_19742
Putative uncharacterized protein (122 aa)
     
 
  0.942
PITG_08708
Putative uncharacterized protein (1005 aa)
     
 
  0.942
PITG_00227
DEAD/DEAH box RNA helicase, putative (609 aa)
   
 
0.940
PITG_02839
DEAD/DEAH box RNA helicase, putative (479 aa)
   
 
0.938
PITG_18755
SDA1 family protein (594 aa)
     
      0.932
PITG_03818
U3 small nucleolar RNA-associated protein, putative (913 aa)
     
      0.932
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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