STRINGSTRING
PITG_02780 protein (Phytophthora infestans) - STRING interaction network
"PITG_02780" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02780Putative uncharacterized protein (2004 aa)    
Predicted Functional Partners:
PITG_00748
Putative uncharacterized protein (2066 aa)
     
        0.612
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
        0.554
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
        0.518
PITG_19671
N-acetyltransferase 10 (1102 aa)
     
        0.517
PITG_22135
60S ribosomal protein L10a-1 (197 aa)
     
      0.515
PITG_03452
Putative uncharacterized protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (756 aa)
     
        0.512
PITG_16107
rRNA biogenesis protein rrp5 (1882 aa)
     
        0.510
PITG_02420
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1179 aa)
     
        0.501
PITG_09374
Putative uncharacterized protein (975 aa)
     
        0.495
PITG_03308
Putative uncharacterized protein (566 aa)
     
        0.491
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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