STRINGSTRING
PITG_02826 protein (Phytophthora infestans) - STRING interaction network
"PITG_02826" - DEAD/DEAH box RNA helicase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02826DEAD/DEAH box RNA helicase, putative (818 aa)    
Predicted Functional Partners:
PITG_02753
DNA polymerase (1223 aa)
     
 
  0.703
PITG_08956
DNA repair protein REV1 (943 aa)
     
      0.635
PITG_15505
DNA polymerase (2403 aa)
     
 
  0.453
PITG_16527
Bloom syndrome protein, DEAD/DEAH box helicase (400 aa)
   
 
  0.444
PITG_14828
ATP-dependent DNA helicase, putative (653 aa)
   
 
  0.444
PITG_10518
Bloom syndrome protein (1022 aa)
   
 
  0.444
PITG_03995
ATP-dependent DNA helicase, putative (515 aa)
   
 
  0.444
PITG_08326
DNA polymerase (1523 aa)
     
 
  0.444
PITG_20527
DNA polymerase (1609 aa)
     
 
  0.443
PITG_03713
DNA polymerase kappa, putative (601 aa)
     
      0.432
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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