STRINGSTRING
PITG_02856 protein (Phytophthora infestans) - STRING interaction network
"PITG_02856" - DEAD/DEAH box RNA helicase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02856DEAD/DEAH box RNA helicase, putative (639 aa)    
Predicted Functional Partners:
PITG_01528
Cell division cycle 5-related protein, putative (761 aa)
     
      0.930
PITG_09956
Pre-mRNA-processing factor, putative (961 aa)
     
 
  0.929
PITG_10941
Elongation factor 2 (859 aa)
     
 
  0.892
PITG_20384
Putative uncharacterized protein (207 aa)
       
 
  0.883
PITG_06482
Eukaryotic translation initiation factor 3 subunit, putative; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (696 aa)
     
 
  0.689
PITG_02478
DEAD/DEAH box RNA helicase, putative (685 aa)
   
 
0.687
PITG_01184
Eukaryotic translation initiation factor 3 subunit G; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA (325 aa)
     
 
  0.644
PITG_00397
Eukaryotic translation initiation factor 3 subunit C, putative; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (970 aa)
     
      0.643
PITG_00980
Nuclear cap-binding protein subunit, putative (892 aa)
     
 
  0.615
PITG_00791
DEAD/DEAH box RNA helicase, putative (476 aa)
   
0.600
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (13%) [HD]