STRINGSTRING
PITG_02996 protein (Phytophthora infestans) - STRING interaction network
"PITG_02996" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_02996Putative uncharacterized protein (130 aa)    
Predicted Functional Partners:
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
       
 
  0.939
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
     
 
  0.938
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
 
  0.930
PITG_09604
Putative uncharacterized protein (775 aa)
     
 
  0.919
PITG_08011
Pre-mRNA-splicing factor RSE1 (1197 aa)
       
 
  0.897
PITG_09488
Small nuclear ribonucleoprotein Sm D3 (113 aa)
       
 
  0.895
PITG_20904
Small nuclear ribonucleoprotein Sm D1 (105 aa)
       
 
  0.890
PITG_10969
Pre-mRNA-processing-splicing factor 8 (2320 aa)
       
 
  0.874
PITG_05666
Small nuclear ribonucleoprotein E (79 aa)
       
 
  0.824
PITG_12291
Pre-mRNA-processing factor 39, putative (793 aa)
     
 
  0.820
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (15%) [HD]