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PITG_03028 protein (Phytophthora infestans) - STRING interaction network
"PITG_03028" - Pre-mRNA-splicing factor SF2 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_03028Pre-mRNA-splicing factor SF2 (297 aa)    
Predicted Functional Partners:
PITG_17045
Mannitol dehydrogenase, putative (543 aa)
     
0.947
PITG_02482
ATP-dependent RNA helicase DHX8 (1158 aa)
     
  0.935
PITG_04486
Putative uncharacterized protein (139 aa)
     
  0.910
PITG_07306
U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative (204 aa)
     
  0.903
PITG_05274
Putative uncharacterized protein (998 aa)
       
 
  0.899
PITG_18720
ATP-citrate synthase (1091 aa)
   
 
  0.884
PITG_11457
Phosphoribosylformylglycinamidine synthase (1332 aa)
   
 
  0.882
PITG_04376
Putative uncharacterized protein (550 aa)
     
  0.863
PITG_05006
U1 small nuclear ribonucleoprotein A (233 aa)
     
  0.857
PITG_05366
Branchpoint-bridging protein, putative (596 aa)
     
  0.837
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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