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PITG_03156 protein (Phytophthora infestans) - STRING interaction network
"PITG_03156" - Pre-rRNA-processing protein TSR1 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_03156Pre-rRNA-processing protein TSR1 (829 aa)    
Predicted Functional Partners:
PITG_00410
Bystin (422 aa)
     
  0.994
PITG_18014
Putative uncharacterized protein (1229 aa)
     
 
  0.993
PITG_13300
RNA-binding protein NOB1 (500 aa)
     
  0.989
PITG_03672
RIO kinase (430 aa)
     
  0.980
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
 
  0.972
PITG_17404
Guanine nucleotide-binding protein (589 aa)
     
 
  0.971
PITG_13380
Guanine nucleotide-binding protein-like 3 (583 aa)
     
 
  0.971
PITG_06667
U3 small nucleolar RNA-associated protein, putative (665 aa)
     
 
  0.971
PITG_16107
rRNA biogenesis protein rrp5 (1882 aa)
     
 
  0.971
PITG_02725
Putative uncharacterized protein (544 aa)
     
 
  0.971
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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