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PITG_03178 protein (Phytophthora infestans) - STRING interaction network
"PITG_03178" - 60S ribosomal protein L9 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_0317860S ribosomal protein L9 (189 aa)    
Predicted Functional Partners:
PITG_18052
60S ribosomal protein L3 (389 aa)
 
  0.998
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
  0.998
PITG_08809
60S ribosomal protein L12, putative (165 aa)
   
  0.998
PITG_17261
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
   
  0.997
PITG_06995
60S ribosomal protein L4 (387 aa)
   
  0.997
PITG_07269
60S ribosomal protein L7 (244 aa)
   
  0.997
PITG_09540
Ribosomal protein L19 (185 aa)
   
  0.997
PITG_06237
60S ribosomal protein L8, putative (256 aa)
   
  0.997
PITG_07300
60S ribosomal protein L35 (123 aa)
   
  0.997
PITG_08959
40S ribosomal protein S3-3 (246 aa)
   
  0.997
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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