STRINGSTRING
PITG_03294 protein (Phytophthora infestans) - STRING interaction network
"PITG_03294" - 60S ribosomal protein L6 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_0329460S ribosomal protein L6 (220 aa)    
Predicted Functional Partners:
PITG_09540
Ribosomal protein L19 (185 aa)
   
  0.996
PITG_10146
40S ribosomal protein S2 (263 aa)
   
  0.996
PITG_15697
60S ribosomal protein L11, putative (133 aa)
   
  0.996
PITG_06799
Ribosomal protein L27 (148 aa)
   
  0.996
PITG_03178
60S ribosomal protein L9 (189 aa)
   
  0.996
PITG_06995
60S ribosomal protein L4 (387 aa)
   
  0.996
PITG_00879
60S ribosomal protein L30, putative (112 aa)
   
  0.996
PITG_02578
Ribosomal protein L15 (206 aa)
     
  0.996
PITG_07300
60S ribosomal protein L35 (123 aa)
   
  0.996
PITG_01833
60S ribosomal protein L13, putative (203 aa)
   
  0.996
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (11%) [HD]