STRINGSTRING
PITG_03364 protein (Phytophthora infestans) - STRING interaction network
"PITG_03364" - RNA polymerase II-associated factor 1 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_03364RNA polymerase II-associated factor 1 (509 aa)    
Predicted Functional Partners:
PITG_03348
RNA polymerase-associated protein CTR9 (1166 aa)
     
  0.988
PITG_08366
Parafibromin-like protein (410 aa)
     
  0.981
PITG_08452
Putative uncharacterized protein (466 aa)
     
  0.972
PITG_13041
RNA polymerase-associated protein RTF1 (760 aa)
     
  0.969
PITG_08392
FACT complex subunit SPT16, putative (1077 aa)
     
  0.961
PITG_14260
FACT complex subunit SSRP1, putative (537 aa)
     
  0.960
PITG_00295
Putative uncharacterized protein (299 aa)
     
  0.949
PITG_17297
Putative uncharacterized protein (1066 aa)
     
  0.949
PITG_00194
Casein kinase II subunit, putative (348 aa)
       
      0.884
PITG_05685
Transcription elongation factor SPT5, putative (1142 aa)
     
  0.869
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (11%) [HD]