STRINGSTRING
PITG_03514 protein (Phytophthora infestans) - STRING interaction network
"PITG_03514" - DNA ligase in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_03514DNA ligase (971 aa)    
Predicted Functional Partners:
PITG_16376
Putative uncharacterized protein (767 aa)
     
  0.939
PITG_14397
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.906
PITG_00828
Phosphatidylinositol kinase (PIK-5) (3432 aa)
     
  0.902
PITG_15505
DNA polymerase (2403 aa)
     
  0.897
PITG_08326
DNA polymerase (1523 aa)
     
  0.871
PITG_20527
DNA polymerase (1609 aa)
     
  0.870
PITG_12104
ATP-dependent DNA helicase 2 subunit, putative (607 aa)
     
  0.859
PITG_03516
DNA polymerase lambda-like protein (472 aa)
   
  0.788
PITG_19182
DNA cross-link repair protein, putative (565 aa)
   
  0.777
PITG_13158
Double-strand break repair protein, putative (863 aa)
     
  0.739
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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