STRINGSTRING
PITG_04037 protein (Phytophthora infestans) - STRING interaction network
"PITG_04037" - tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_04037tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA (696 aa)    
Predicted Functional Partners:
PITG_18735
Vacuolar protein sorting-associated protein, putative (623 aa)
 
 
        0.718
PITG_07874
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1505 aa)
   
   
  0.704
PITG_07823
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (807 aa)
   
   
  0.704
PITG_01300
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1329 aa)
   
   
  0.704
PITG_08823
tRNA-specific 2-thiouridylase mnmA, putative (416 aa)
 
 
  0.664
PITG_03292
GTPase (428 aa)
     
 
  0.618
PITG_00577
Putative uncharacterized protein (850 aa)
     
 
  0.583
PITG_13344
Cytochrome Oxidase Biogenesis (Oxa1) Family (360 aa)
   
   
  0.518
PITG_01749
Putative uncharacterized protein (515 aa)
   
   
  0.518
PITG_01748
Mitochondrial inner membrane protein OXA1 (371 aa)
   
   
  0.518
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (8%) [HD]