STRINGSTRING
PITG_04500 protein (Phytophthora infestans) - STRING interaction network
"PITG_04500" - Nucleosome assembly protein 1 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_04500Nucleosome assembly protein 1 (367 aa)    
Predicted Functional Partners:
PITG_00695
Importin, putative (1057 aa)
     
 
  0.918
PITG_02527
Histone H2A (136 aa)
       
 
  0.911
PITG_03882
Histone H2A (140 aa)
       
 
  0.880
PITG_03881
Histone H2A (139 aa)
       
 
  0.880
PITG_00443
40S ribosomal protein S6 (242 aa)
     
 
  0.841
PITG_03611
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (117 aa)
     
 
  0.808
PITG_03550
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (115 aa)
     
 
  0.808
PITG_01144
Putative uncharacterized protein (229 aa)
     
 
  0.783
PITG_18755
SDA1 family protein (594 aa)
     
 
  0.669
PITG_13676
Putative uncharacterized protein (51 aa)
     
      0.645
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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