STRINGSTRING
PITG_04538 protein (Phytophthora infestans) - STRING interaction network
"PITG_04538" - Splicing factor 3 subunit, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_04538Splicing factor 3 subunit, putative (628 aa)    
Predicted Functional Partners:
PITG_00117
Splicing factor 3A (493 aa)
     
  0.997
PITG_05126
Splicing factor 3A subunit, putative (244 aa)
     
  0.997
PITG_19646
Pre-mRNA-processing factor 19, putative (524 aa)
     
  0.986
PITG_09956
Pre-mRNA-processing factor, putative (961 aa)
     
  0.986
PITG_01528
Cell division cycle 5-related protein, putative (761 aa)
     
  0.985
PITG_08011
Pre-mRNA-splicing factor RSE1 (1197 aa)
     
  0.967
PITG_15575
Splicing factor 3B subunit 4 (188 aa)
     
  0.964
PITG_07775
Splicing factor 3B subunit, putative (235 aa)
     
  0.959
PITG_06171
Splicing factor 3B subunit 1 (1235 aa)
     
  0.959
PITG_14399
Pre-mRNA-processing factor, putative (619 aa)
     
  0.957
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (30%) [HD]