STRINGSTRING
PITG_04608 protein (Phytophthora infestans) - STRING interaction network
"PITG_04608" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_04608Putative uncharacterized protein (496 aa)    
Predicted Functional Partners:
PITG_17394
Developmentally-regulated GTP-binding protein 1 (369 aa)
     
 
  0.965
PITG_05638
GTPase, putative (407 aa)
     
 
  0.859
PITG_06589
Putative uncharacterized protein (227 aa)
     
      0.584
PITG_06274
Ubiquitin-specific protease, putative (620 aa)
     
      0.562
PITG_07047
THO complex subunit, putative (595 aa)
     
      0.528
PITG_09504
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (432 aa)
     
      0.525
PITG_02420
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1179 aa)
     
      0.520
PITG_13460
Putative uncharacterized protein (720 aa)
       
      0.511
PITG_11476
Putative uncharacterized protein (381 aa)
       
      0.511
PITG_05494
Putative uncharacterized protein (326 aa)
       
      0.511
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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