STRINGSTRING
PITG_04709 protein (Phytophthora infestans) - STRING interaction network
"PITG_04709" - DNA ligase in Phytophthora infestans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_04709DNA ligase (3896 aa)    
Predicted Functional Partners:
PITG_14397
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.982
PITG_07399
DNA replication licensing factor MCM5 (741 aa)
     
 
  0.976
PITG_15505
DNA polymerase (2403 aa)
     
  0.953
PITG_08326
DNA polymerase (1523 aa)
     
  0.952
PITG_04527
DNA replication licensing factor mcm4, putative (1024 aa)
     
 
  0.931
PITG_20527
DNA polymerase (1609 aa)
     
  0.917
PITG_03389
Replication factor C subunit 4 (339 aa)
   
  0.916
PITG_05302
Replication factor C subunit 5 (353 aa)
   
  0.902
PITG_12346
DNA replication licensing factor MCM3 (805 aa)
     
 
  0.887
PITG_03624
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (389 aa)
   
  0.884
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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