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PITG_04843 protein (Phytophthora infestans) - STRING interaction network
"PITG_04843" - 60S ribosomal protein L13 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_0484360S ribosomal protein L13 (205 aa)    
Predicted Functional Partners:
PITG_09555
Ubiquitin-ribosomal fusion protein, putative (128 aa)
     
    0.997
PITG_00941
60S ribosomal protein L21-1 (160 aa)
     
  0.996
PITG_06995
60S ribosomal protein L4 (387 aa)
     
  0.996
PITG_15697
60S ribosomal protein L11, putative (133 aa)
     
  0.996
PITG_07300
60S ribosomal protein L35 (123 aa)
     
  0.996
PITG_19999
40S ribosomal protein S14 (150 aa)
     
  0.996
PITG_00879
60S ribosomal protein L30, putative (112 aa)
     
  0.995
PITG_08703
60S ribosomal protein L36 (107 aa)
     
  0.995
PITG_17261
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (318 aa)
     
  0.995
PITG_08959
40S ribosomal protein S3-3 (246 aa)
     
  0.995
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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