STRINGSTRING
PITG_05176 protein (Phytophthora infestans) - STRING interaction network
"PITG_05176" - Histone deacetylase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05176Histone deacetylase, putative (680 aa)    
Predicted Functional Partners:
PITG_04499
Histone deacetylase (447 aa)
   
  0.942
PITG_01897
Histone deacetylase (461 aa)
   
  0.906
PITG_01911
Histone deacetylase, putative (226 aa)
   
  0.905
PITG_21309
Histone deacetylase, putative (319 aa)
   
  0.898
PITG_06753
Paired amphipathic helix protein Sin3, putative (1578 aa)
     
  0.877
PITG_11170
Histone-binding protein RBBP4 (443 aa)
     
  0.864
PITG_10083
Chromodomain protein, putative (1748 aa)
     
  0.847
PITG_18027
Histone acetyltransferase, putative (873 aa)
     
  0.839
PITG_01456
Histone acetyltransferase ESA1 (468 aa)
     
  0.832
PITG_00718
Mono-ADP-ribosyltransferase sirtuin-6-like protein (363 aa)
   
  0.827
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (9%) [HD]