STRINGSTRING
PITG_05404 protein (Phytophthora infestans) - STRING interaction network
"PITG_05404" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05404Putative uncharacterized protein (1098 aa)    
Predicted Functional Partners:
PITG_20611
Nucleoporin-like protein (345 aa)
     
  0.994
PITG_01257
Nucleoporin NUP85-like protein (666 aa)
     
  0.983
PITG_11743
Nuclear pore complex protein, putative (2054 aa)
     
  0.971
PITG_07103
Nuclear pore complex protein Nup155 (1504 aa)
     
  0.970
PITG_12694
Protein transport protein SEC13 (309 aa)
     
  0.963
PITG_03390
WD domain-containing protein, putative (342 aa)
     
  0.963
PITG_00262
Nuclear pore complex protein Nup93-like protein (911 aa)
     
  0.951
PITG_16006
Putative uncharacterized protein (508 aa)
     
 
  0.885
PITG_22839
Nuclear mitotic apparatus protein, putative (1904 aa)
     
  0.872
PITG_06257
Putative uncharacterized protein (2100 aa)
     
  0.871
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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