STRINGSTRING
PITG_05411 protein (Phytophthora infestans) - STRING interaction network
"PITG_05411" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05411Putative uncharacterized protein (254 aa)    
Predicted Functional Partners:
PITG_08211
U2-associated splicing factor, putative (907 aa)
     
    0.757
PITG_05126
Splicing factor 3A subunit, putative (244 aa)
     
  0.748
PITG_07775
Splicing factor 3B subunit, putative (235 aa)
     
  0.653
PITG_06171
Splicing factor 3B subunit 1 (1235 aa)
     
  0.653
PITG_13365
Poly(U)-binding-splicing factor PUF60, putative (444 aa)
     
 
  0.640
PITG_04376
Putative uncharacterized protein (550 aa)
     
  0.612
PITG_05366
Branchpoint-bridging protein, putative (596 aa)
     
  0.607
PITG_09943
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 (719 aa)
     
  0.579
PITG_11972
Pre-mRNA-splicing factor 38A, putative (199 aa)
     
 
  0.549
PITG_05006
U1 small nuclear ribonucleoprotein A (233 aa)
     
 
  0.537
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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