STRINGSTRING
PITG_05534 protein (Phytophthora infestans) - STRING interaction network
"PITG_05534" - Nucleolar protein Nop56 in Phytophthora infestans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05534Nucleolar protein Nop56 (514 aa)    
Predicted Functional Partners:
PITG_07308
rRNA 2’-O-methyltransferase fibrillarin, putative (326 aa)
 
  0.994
PITG_09374
Putative uncharacterized protein (975 aa)
     
  0.990
PITG_09432
Nucleolar protein NOP5 (519 aa)
   
0.988
PITG_03818
U3 small nucleolar RNA-associated protein, putative (913 aa)
     
  0.988
PITG_02887
Ribosome biogenesis protein BMS1 (1192 aa)
     
  0.988
PITG_19671
N-acetyltransferase 10 (1102 aa)
     
 
  0.987
PITG_00227
DEAD/DEAH box RNA helicase, putative (609 aa)
     
 
  0.971
PITG_14248
rRNA-processing protein EBP2, putative (313 aa)
     
 
  0.970
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
  0.969
PITG_02420
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1179 aa)
     
  0.968
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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