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PITG_05630 protein (Phytophthora infestans) - STRING interaction network
"PITG_05630" - U3 small nucleolar ribonucleoprotein protein IMP4 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05630U3 small nucleolar ribonucleoprotein protein IMP4 (287 aa)    
Predicted Functional Partners:
PITG_06262
U3 small nucleolar ribonucleoprotein protein IMP3 (184 aa)
     
  0.997
PITG_03876
U3 small nucleolar RNA-interacting protein, putative (471 aa)
     
  0.990
PITG_02593
U3 small nucleolar ribonucleoprotein, putative (344 aa)
     
  0.987
PITG_00052
Periodic tryptophan protein 2 (908 aa)
     
  0.978
PITG_06991
FHA domain-interacting nucleolar phosphoprotein, putative (246 aa)
     
 
  0.978
PITG_00036
U3 small nucleolar RNA-associated protein 6 (671 aa)
     
  0.976
PITG_08441
Putative uncharacterized protein (347 aa)
     
      0.976
PITG_17155
RNA 3’-terminal phosphate cyclase, putative (594 aa)
     
 
  0.976
PITG_07017
Putative uncharacterized protein (1151 aa)
     
 
  0.975
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
  0.973
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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