STRINGSTRING
PITG_05770 protein (Phytophthora infestans) - STRING interaction network
"PITG_05770" - Neutral ceramidase, putative in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05770Neutral ceramidase, putative (388 aa)    
Predicted Functional Partners:
PITG_13546
Sphingosine kinase, putative (501 aa)
     
 
  0.925
PITG_06556
Transmembrane protein, putative (493 aa)
         
  0.904
PITG_20117
3-ketodihydrosphingosine reductase, putative (322 aa)
         
    0.900
PITG_19939
Glucosylceramidase, putative (580 aa)
         
    0.900
PITG_17987
Putative uncharacterized protein (829 aa)
         
    0.900
PITG_17509
Glucosylceramidase, putative (226 aa)
         
    0.900
PITG_17508
Glucosylceramidase, putative (499 aa)
         
    0.900
PITG_17507
Glucosylceramidase, putative (516 aa)
         
    0.900
PITG_17506
Glucosylceramidase, putative (283 aa)
         
    0.900
PITG_17502
Putative uncharacterized protein (155 aa)
         
    0.900
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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