STRINGSTRING
PITG_05782 protein (Phytophthora infestans) - STRING interaction network
"PITG_05782" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05782Putative uncharacterized protein (363 aa)    
Predicted Functional Partners:
PITG_21350
Putative uncharacterized protein (445 aa)
       
      0.511
PITG_14279
Putative uncharacterized protein (377 aa)
       
      0.511
PITG_08189
Pre-mRNA-splicing factor, Crooked neck-like protein (688 aa)
       
      0.511
PITG_05935
DEAD/DEAH box RNA helicase, putative (823 aa)
       
      0.511
PITG_05909
Putative uncharacterized protein (539 aa)
       
      0.511
PITG_03564
Putative uncharacterized protein; Phosphodiesterase responsible for the U6 snRNA 3’ end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA (235 aa)
       
      0.511
PITG_01528
Cell division cycle 5-related protein, putative (761 aa)
       
      0.511
PITG_05376
Mitogen-activated protein kinase organizer, putative (310 aa)
       
      0.502
PITG_08886
DEAD/DEAH box RNA helicase, putative (2164 aa)
       
      0.429
PITG_14278
Eukaryotic translation initiation factor 4 gamma, putative (967 aa)
       
      0.412
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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