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PITG_05796 protein (Phytophthora infestans) - STRING interaction network
"PITG_05796" - Ribosomal RNA-processing protein, putative in Phytophthora infestans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_05796Ribosomal RNA-processing protein, putative (281 aa)    
Predicted Functional Partners:
PITG_19742
Putative uncharacterized protein (122 aa)
     
   
  0.771
PITG_08708
Putative uncharacterized protein (1005 aa)
     
   
  0.771
PITG_17365
U3 small nucleolar RNA-associated protein, putative; Involved in nucleolar processing of pre-18S ribosomal RNA (250 aa)
     
      0.735
PITG_00227
DEAD/DEAH box RNA helicase, putative (609 aa)
     
        0.727
PITG_00165
Putative uncharacterized protein (340 aa)
     
        0.725
PITG_13016
Pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (631 aa)
     
        0.719
PITG_10725
Ribosomal RNA processing protein 1 (507 aa)
     
        0.718
PITG_14248
rRNA-processing protein EBP2, putative (313 aa)
     
        0.712
PITG_09439
Putative uncharacterized protein (501 aa)
     
        0.709
PITG_17404
Guanine nucleotide-binding protein (589 aa)
     
      0.698
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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