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PITG_06262 protein (Phytophthora infestans) - STRING interaction network
"PITG_06262" - U3 small nucleolar ribonucleoprotein protein IMP3 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_06262U3 small nucleolar ribonucleoprotein protein IMP3 (184 aa)    
Predicted Functional Partners:
PITG_05630
U3 small nucleolar ribonucleoprotein protein IMP4 (287 aa)
     
  0.997
PITG_19999
40S ribosomal protein S14 (150 aa)
   
  0.997
PITG_12947
40S ribosomal protein S23, putative (116 aa)
   
  0.997
PITG_07173
40S ribosomal protein S15 (155 aa)
   
  0.997
PITG_01922
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (283 aa)
   
  0.997
PITG_08959
40S ribosomal protein S3-3 (246 aa)
   
  0.997
PITG_03221
40S ribosomal protein S18 (152 aa)
   
  0.997
PITG_09345
40S ribosomal protein S5-2 (196 aa)
   
  0.997
PITG_16757
40S ribosomal protein S15a (130 aa)
   
  0.997
PITG_03178
60S ribosomal protein L9 (189 aa)
   
  0.996
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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