STRINGSTRING
PITG_06263 protein (Phytophthora infestans) - STRING interaction network
"PITG_06263" - H/ACA ribonucleoprotein complex subunit 4 in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_06263H/ACA ribonucleoprotein complex subunit 4 (480 aa)    
Predicted Functional Partners:
PITG_19608
Ribosomal protein L7Ae/L30e/S12e/Gadd4, putative (147 aa)
   
  0.997
PITG_06991
FHA domain-interacting nucleolar phosphoprotein, putative (246 aa)
     
 
  0.991
PITG_09432
Nucleolar protein NOP5 (519 aa)
   
 
  0.988
PITG_07308
rRNA 2’-O-methyltransferase fibrillarin, putative (326 aa)
   
 
  0.985
PITG_15652
H/ACA ribonucleoprotein complex subunit, putative (277 aa)
     
  0.979
PITG_19178
13 kDa ribonucleoprotein-associated protein (128 aa)
   
  0.959
PITG_18717
H/ACA ribonucleoprotein complex subunit 3 (65 aa)
     
  0.953
PITG_07327
H/ACA ribonucleoprotein complex non-core subunit NAF1, putative (489 aa)
     
 
  0.938
PITG_04384
Ribosome biogenesis regulatory protein (308 aa)
     
      0.933
PITG_02450
Ribosomal RNA assembly protein mis3; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (395 aa)
     
 
  0.932
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
Server load: low (9%) [HD]