STRINGSTRING
PITG_06363 protein (Phytophthora infestans) - STRING interaction network
"PITG_06363" - Putative uncharacterized protein in Phytophthora infestans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITG_06363Putative uncharacterized protein (512 aa)    
Predicted Functional Partners:
PITG_15415
Histone deacetylase, putative (390 aa)
   
  0.760
PITG_12962
Histone deacetylase, putative (370 aa)
   
  0.760
PITG_08237
Histone deacetylase, putative (862 aa)
   
  0.760
PITG_05176
Histone deacetylase, putative (680 aa)
   
  0.760
PITG_03547
Putative uncharacterized protein (750 aa)
       
  0.757
PITG_21309
Histone deacetylase, putative (319 aa)
   
  0.756
PITG_04499
Histone deacetylase (447 aa)
   
  0.756
PITG_01911
Histone deacetylase, putative (226 aa)
   
  0.756
PITG_01897
Histone deacetylase (461 aa)
   
  0.756
PITG_03552
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
  0.704
Your Current Organism:
Phytophthora infestans
NCBI taxonomy Id: 4787
Other names: P. infestans, Phytophthora infestans, potato late blight, potato late blight agent, potato late blight fungus
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